FastQCFastQC Report
Thu 27 Jun 2019
ERR1702144.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
FilenameERR1702144.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences38228293
Sequences flagged as poor quality0
Sequence length100
%GC47

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
CTCATGCATATCACATAGTTAATCCAAGTCCATGACCATTAACTGGAGCC482030.12609247292313053No Hit
CTCATCAATAAATGGAGACGTATAGGAAAAGTCAGACTACGTCTACAAAA393320.10288714696206813No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.8)